APOE gene polymorphisms associated with Down syndrome in Colombian populations
Abstract
Introduction. Gene APOEε4 allele polymorphisms have been examined in Down syndrome because of the relationship between (a) the E4 isoform and (b) the type of Alzheimer’s dementia that appears in individuals with Down syndrome. This isoform is considered a risk factor for Alzheimer´s disease development and has been associated with early death in Down syndrome.
Objectives. The polymorphisms in the APOE gene were characterized for Down syndrome individuals and their parents, in order to detect associations between the APOE polymorphisms and Down syndrome.
Materials and methods. APOE gene polymorphisms were detected by RFLP-PCR and analyzed in 134 young individuals with Down syndrome, 87 mothers and 54 fathers, residents of the departments of Quindío and Risaralda, Colombia. The controls were 525 healthy individuals.
Results. The APOEε3 allele and ε3/ε3 genotype were most frequent in all the populations (83-90% and 70-78%). The allelic frequency of APOEε2 was very low and ε2/ε2 (3-7%) was absent in Down syndrome and their parents. The allele APOEε4 was more frequent (11% vs. 9%) in Down syndrome individuals than in the controls. Comparing the allelic and genotypic frequencies between the populations with Down syndrome and their parents with the controls using Pearson c2 test and Fisher’s exact test odds ratio, no statistically significant differences were found.
Conclusions. No statistically significant association was found between the polymorphisms of the APOE gene and Down syndrome. Sample size or ethnic influences may have affected these results. More studies are necessary with other Colombian populations to determine possible associations in other genes related to Alzheimer’s disease.
Downloads
References
Sherman SL, Allen MG, Bean LH, Freeman SB. Epidemiology of Down syndrome. Ment Retard Dev D R. 2007;13:221-7. doi: http://dx.doi.org/10.1002/mrdd.20157
Allen EG, Freeman SB, Druschel C, Hobbs CA, O’Leary LA, Romitti PA, et al. Maternal age and risk for trisomy 21 assessed by the origin of chromosome nondisjuntion: A report from the Atlanta and National Down Syndrome Projects. Hum Genet. 2009;125:41-2. doi: http://dx.doi.org/10.1007/s00439-008-0603-8
Antonarakis SE, Petersen MB, McInnis MG, Adelsberger PA, Schinzel AA, Binkert F, et al. The meiotic stage of nondisjunction in trisomy 21: Determination by using DNA polymorphisms. Am J Hum Genet. 1992;50:544-50. PMid:1347192 PMCid:1684265
Sherman SL, Petersen MB, Freeman SB, Hersey J, Pettay D, Taft M, et al. Non-disjunction of chromosome 21 in maternal meiosis I: Evidence for a maternal agedependent mechanism involving reduced recombination. Hum Mol Genet. 1994;3:1529-35. doi: http://dx.doi.org/10.1093/hmg/3.9.1529
Petersen MB, Mikkelsen M. Nondisjuntion in trisomy 21: Origin and mechanism. Cytogenet Cell Genet. 2000;91:199-203. doi: http://dx.doi.org/10.1159/000056844
Malini SS, Ramachandra NB. Influence of advanced age of maternal grandmothers on Down syndrome. BMC Med Genet. 2006;7:1-5. doi: http://dx.doi.org/10.1186/1471-2350-7-4
Dupuy AM, Mas E, Ritchie K, Descomps B, Badiou S, Cristol JP, et al. The relationship between apolipoprotein E4 and lipid metabolism is impaired in Alzheimer’s disease. Gerontology. 2001;47:213-8. doi: http://dx.doi.org/10.1159/000052801
Tyrrell J, Cosgrave M, McCarron M, McPherson J, Calvert J, Kelly A, et al. Dementia in people with Down’s syndrome. Int J Geriatr Psychiat. 2001;16:1168-74. doi: http://dx.doi.org/10.1002/gps.502
Patel A, Rees SD, Kelly MA, Bain SC, Barnett AH, Thalitaya D, et al. Association of variants within APOE, SORL1, RUNX1, BACE1 and ALDH18A1 with dementia in Alzheimer’s disease in subjects with Down syndrome. Neurosci Lett. 2011;487:144-8. doi: http://dx.doi.org/10.1016/j.neulet.2010.10.010
Visser FE, Aldenkamp AP, van Huffelen AC, Kuilman M, Overweg J, van Wijk J. Prospective study of the prevalence of Alzheimer type dementia in institutionalized individuals with Down syndrome. Am J Ment Retard. 1997;101:400-12. PMid:9017086
Chu SH, Roeder K, Ferrell RE, Devlin B, DeMichele-Sweet MA, Kamboh MI et al. TOMM40 poly-T repeat lengths, age of onset and psychosis risk in Alzheimer disease. Neurobiol Aging. 2011;32:2328:e1-9.
Seripa D, Matera MG, Daniele A, Bizzarro A, Rinaldi MC, Gravina L, et al. The missing ApoE allele. Ann Hum Genet. 2007;71:496-500. doi: http://dx.doi.org/10.1111/j.1469-1809.2006.00344.x
Sando SB, Melquist S, Cannon A, Hutton ML, Sletvold O, Saltvedt I, et al. APOE epsilon 4 lowers age at onset and is a high risk factor for Alzheimer’s disease; a case control study from central Norway. BMC Neurol. 2008;8:1-7. doi: http://dx.doi.org/10.1186/1471-2377-8-9
Khachaturian AS, Corcoran CD, Mayer LS, Zandi PP, Breitner JC. Apolipoprotein E epsilon4 count affects age at onset of Alzheimer disease, but not lifetime susceptibility: The Cache County Study. Arch Gen Psychiat. 2004;5:518-24. doi: http://dx.doi.org/10.1001/archpsyc.61.5.518
Corder A, Saunders W, Strittmatter D, Schmechel P, Gaskell G, Small G, et al. Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer’s disease in late onset families. Science. 1993;261:921-3. doi: http://dx.doi.org/10.1126/science.8346443
Jacquier M, Villareal E, Torres O, Serrano ML, Cruts M, Montañes P, et al. APOE epsilon4 and Alzheimer’s disease: Positive association in a Colombian clinical series and review of the Latin-American studies. Arq Neuropsiquiatr. 2001;59:11-7. doi: http://dx.doi.org/10.1590/S0004-282X2001000100004
Huang Y. Apolipoprotein E and Alzheimer disease. Neurology.
;66(Suppl.1):S79-85. doi: http://dx.doi.org/10.1212/01.wnl.0000192102.41141.9e
Verghese PB, Castellano JM, Holtzman DM. Apoliprotein E in Alzheimer’s disease and other neurological disorders. Lancet Neurol. 2011;10:241-52. doi: http://dx.doi.org/10.1016/S1474-4422(10)70325-2
Arboleda GH, Yunis JJ, Pardo R, Gómez CM, Hedmont D, Arango G, et al. Apolipoprotein E genotyping in a sample of Colombian patients with Alzheimer’s disease. Neurosci Lett. 2001;135-8. doi: http://dx.doi.org/10.1016/S0304-3940(01)01829-8
Corder E, Saunders A, Risch M, Strittmatter W, Schmechel D, Gaskell P, et al. Protective effect of apolipoprotein E type 2 allele for late onset Alzheimer disease. Nat Genet. 1994;7:180-4. doi: http://dx.doi.org/10.1038/ng0694-180
Trachtenberg AJ, Filippini N, Cheeseman J, Duff EP, Neville MJ, Ebmeier KP, et al. The effects of APOE on brain activity do no simply reflect the risk of Alzheimer’s disease. Neurobiol Aging. 2012;618:e1-13.
Coppus AM, Evenhuis HM, Verberne GJ, Visser FE, Vásquez AA, Sayed-Tabatabaei F, et al. The impact of apolipoprotein E on dementia in persons with Down’s syndrome. Neurobiol Aging. 2008;29:828-35. doi: http://dx.doi.org/10.1016/j.neurobiolaging.2006.12.013
Tyrell j, Cosgrave M, Hawi Z, McPherson J, O’Brien C, McCalvert J, et al. A protective effect of apolipoprotein E e2 allele on dementia in Down’s syndrome. Biol Psychiatry. 1998;43:397-400.
Prasher VP, Sajith SG, Rees SD, Patel A, Tewari S, Schupf N, et al. Significant effect of APOE epsilon 4 genotype on the risk of dementia in Alzheimer’s disease and mortality in persons with Down syndrome. Int J Geriatr Psychiatry. 2008;11:1134-40. doi: http://dx.doi.org/10.1002/gps.2039
Alexander GE, Saunders AM, Szczepanik J, Strassburger TL, Pietrini P, Danni A, et al. Relation of age and apolipoprotein E to cognitive function in Down syndrome adults. Neuroreport. 1997;8:1835-40. doi: http://dx.doi.org/10.1097/00001756-199705260-00009
Zigman WB, Jenkins EC, Tycko B, Schupf N, Silverman W. Mortality is associated with apolipoprotein E epsilon4 in non demented adults with Down syndrome. Neurosci Lett. 2005;390:93-7. doi: http://dx.doi.org/10.1016/j.neulet.2005.08.002
Schupf N, Sergievsky GH. Genetic and host factors for dementia in Down’s syndrome. Br J Psychiatry 2002;180:405-10. doi: http://dx.doi.org/10.1192/bjp.180.5.405
Lai F, Kammann E, Rebeck GW, Anderson A, Chen Y, Nixon RA. APOE genotype and gender effects on Alzheimer disease in 100 adults with Down syndrome. Neurology. 1999;53:331-6. doi: http://dx.doi.org/10.1212/WNL.53.2.331
Prasher VP Chowdhury T, Rowe B, Bain S. ApoE genotype and Alzheimer’s disease in adults with Down syndrome: Meta-analysis. Am J Ment Retard. 1997;102:103-10. doi: http://dx.doi.org/10.1352/0895-8017(1997)102<0103:AGAADI>2.0.CO;2
Anello G, Guéant J, Romano C, Barone C, Pettinato R, Pillot T, et al. Allele e4 of apolipoprotein E gene is less frequent in Down syndrome patients of the Sicilian population and has no influence on the grade of mental retardation. Neurosci Lett. 2001;306:129-1. doi: http://dx.doi.org/10.1016/S0304-3940(01)01851-1
Lambert JC, Tur JP, Duperi MJ, Delacourte A, Frigard B, Chatier-Harlim MC. Analysis of the APOE alleles impact in Down’s syndrome. Neurosci Lett. 1996; 220:57-60. doi: http://dx.doi.org/10.1016/S0304-3940(96)13244-4
Schupf N, Kapell D, Lee J, Ottman R, Mayeus R. Increased risk of Alzheimer’s disease in mothers of adults with Down’s syndrome. Lancet 1994;344: 353-6. doi: http://dx.doi.org/10.1016/S0140-6736(94)91398-6
Avramopoulos D, Mikkelsen M, Vassilopoulos D, Grigoriadou M, Petersen M. Apolipoprotein E allele distribution in parents of Down’s syndrome children. Lancet. 1996;347:862-5. doi: http://dx.doi.org/10.1016/S0140-6736(96)91346-X
Rodríguez J, Cediel V. Genotipificación de apolipoproteína E en la población de Risaralda. Rev Med Risaralda. 1999;5:2-7.
Hixon J, Vernier V. Restriction isotyping of human apolipoporotien E by gene amplification and cleavage with HhaI. J Lipid Res. 1990;31:545-8. PMid:2341813
Deb S, Braganza J, Norton N, Williams H, Kehoe PG, Williams J, et al. ApoE e4 influences the manifestation of Alzheimer’s disease in adults with Down’s syndrome. Br J Psychiatry. 2000;176:468-72. doi: http://dx.doi.org/10.1192/bjp.176.5.468
van Gool WA, Evenhuis HM, van Duijn CM. A case-control study of apolipoprotein E genotypes in Alzheimer’s disease associated with Down’s syndrome. Dutch Study Group on Down’s Syndrome and Ageing. Ann Neurol. 1995;38:225-30. doi: http://dx.doi.org/10.1002/ana.410380215
Jaramillo-Correa JP, Keyeux G, Ruiz-García M, Rodas C, Bernal J. Population genetic análisis of the genes APOE, APOB (3´VNTR) and ACE in some black and Amerindian communities from Colombia. Hum Hered. 2001;52:14-33. doi: http://dx.doi.org/10.1159/000053351
Some similar items:
- Martha Ruiz, Isis Arias, Gloria Rolón, Enio Hernández, Pilar Garavito, Carlos Silvera-Redondo, APOE gene polymorphism analysis in Barranquilla, Colombia , Biomedica: Vol. 36 No. 1 (2016)
- Yazmin Rocío Arias, Karime Osorio-Arango, Brayan Bayona, Guadalupe Ercilla, Mauricio Beltrán-Durán, Determination of HLA-A, -B and -DRB1 polymorphism in brain dead organ donors representative of the Colombian general population, 2007-2014 , Biomedica: Vol. 37 No. 2 (2017)
- Marcela Gaviria-Calle, Alejandra Duque-Jaramillo, Mateo Aranzazu, Diana di Filippo, Melissa Montoya, Ingrid Roldán, Natalia Palacio, Sergio Jaramillo, Juan Carlos Restrepo, Sergio Hoyos, María Cristina Navas, Polymorphisms in alcohol dehydrogenase (ADH1) and cytochrome p450 2E1 (CYP2E1) genes in patients with cirrhosis and/or hepatocellular carcinoma , Biomedica: Vol. 38 No. 4 (2018)
- Andrés Gómez-Palacio, Juan Suaza-Vasco, Sandra Castaño, Omar Triana, Sandra Uribe, Aedes albopictus (Skuse, 1894) infected with the American-Asian genotype of dengue type 2 virus in Medellín suggests its possible role as vector of dengue fever in Colombia , Biomedica: Vol. 37 No. Sup. 2 (2017): Suplemento 2, Entomología médica, 2017
- María Claudia Atencia, María de Jesús Pérez, María Cristina Jaramillo, Sandy Milena Caldera, Suljey Cochero, Eduar Elías Bejarano, First report of the F1534C mutation associated with cross-resistance to DDT and pyrethroids in Aedes aegypti from Colombia , Biomedica: Vol. 36 No. 3 (2016)
- Efren Avendaño-Tamayo, Omer Campo, Juan Camilo Chacón-Duque, Ruth Ramírez, Winston Rojas, Piedad Agudelo-Flórez, Gabriel Bedoya, Berta Nelly Restrepo, Variants in the TNFA, IL6 and IFNG genes are associated with the dengue severity in a sample from Colombian population , Biomedica: Vol. 37 No. 4 (2017)
- Katherine Laiton-Donato, José A. Usme-Ciro, Angélica Rico, Lissethe Pardo, Camilo Martínez, Daniela Salas, Susanne Ardila, Andrés Páez, Phylogenetic analysis of Chikungunya virus in Colombia: Evidence of purifying selection in the E1 gene , Biomedica: Vol. 36 (2016): Suplemento 2, Enfermedades virales
- Andrés Javier Quiroga, Diana Marcela Cittelly, María Mercedes Bravo, BabA2, oipA and cagE Helicobacter pylori genotypes in Colombian patients with gastroduodenal diseases. , Biomedica: Vol. 25 No. 3 (2005)
- Alberto Gómez, Sandra J. Ávila, Ignacio Briceño, Correlation analysis of surnames and Y-chromosome genetic heritage in 3 provinces of southwestern Colombia , Biomedica: Vol. 28 No. 3 (2008)
- Jorge Iván Zapata-Valencia, Diana Maritza Jurado-Orejuela, Ofelia Flórez-Echeverry, Erica Marcela Aristizábal-Giraldo, Jhonathan León Gallego-Franco, María Camila Yolanda Ramírez-Uribe, Jemina Rentería-Molina, Alejandra Sandoval-Villareal, Yermaín Ulabarri-Valencia, Juan Carlos Zambrano-Camelo, Prevalence of intestinal parasites in street dwellers attending a shelter in Cali, Colombia , Biomedica: Vol. 44 No. 4 (2024)
Article metrics | |
---|---|
Abstract views | |
Galley vies | |
PDF Views | |
HTML views | |
Other views |